SynRBPbind

Estimating RNA-RBPs binding using convolutional neural networks trained on oligo libraries

DeepSELEX

Inference of DNA-binding preferences from HT-SELEX data using deep neural networks

DeCoDe

Degenerate codon design for complete protein-coding DNA libraries

DeepSHAPE

Deep Learning for Predicting RNA SHAPE Reactivity Scores

G4detector

Deep Learning for Predicting G-quadruplexes

DLPRB

Deep Learning for Protein-RNA binding

JokerCAKE

Covering All K-mErs using Joker characters

DOCKS

Design Of Compact universal K-mer hitting Sets

SELMAP

SELEX affinity landscape MAPping of transcription factor binding

RCK

RCK - RNAcontext K-mer - predicting protein-RNA interactions

CURLCAKE

CURLCAKE - Compact Universal RNA Libraries Covering All K-mErs